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CN09_22250 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_22250" - Nucleoside 2-deoxyribosyltransferase in Agrobacterium rhizogenes
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_22250Nucleoside 2-deoxyribosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (197 aa)    
Predicted Functional Partners:
CN09_22255
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (430 aa)
     
      0.717
queE
7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds (245 aa)
              0.652
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2’-deoxyuridine- 5’-monophosphate (dUMP) to 2’-deoxythymidine-5’-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis (307 aa)
              0.652
CN09_04385
Calcium-proton antiporter; Derived by automated computational analysis using gene prediction method- Protein Homology (365 aa)
              0.652
CN09_14330
Polyketide cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (148 aa)
 
          0.650
gpt
Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily (165 aa)
              0.536
CN09_22130
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (364 aa)
   
          0.494
CN09_08595
Flavin reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (194 aa)
              0.441
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (520 aa)
         
  0.434
CN09_22260
Amidohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (390 aa)
              0.433
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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