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CN09_22495 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_22495" - C4-dicarboxylate ABC transporter substrate-binding protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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[Homology]
Score
CN09_22495C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (314 aa)    
Predicted Functional Partners:
CN09_26870
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (395 aa)
 
          0.999
CN09_22485
Tripartite tricarboxylate transporter TctA; Derived by automated computational analysis using gene prediction method- Protein Homology (505 aa)
   
  0.997
CN09_22490
C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (163 aa)
 
          0.988
CN09_06240
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (535 aa)
              0.877
CN09_22505
Iron ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (355 aa)
              0.842
CN09_11865
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (223 aa)
              0.726
CN09_05320
3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (294 aa)
            0.720
CN09_14790
Phosphonomutase; Derived by automated computational analysis using gene prediction method- Protein Homology (256 aa)
         
  0.649
CN09_22515
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (463 aa)
 
          0.612
CN09_26805
3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method- Protein Homology (629 aa)
              0.606
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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