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CN09_22570 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_22570" - PadR family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
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[Homology]
Score
CN09_22570PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (108 aa)    
Predicted Functional Partners:
CN09_22565
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (189 aa)
 
          0.987
CN09_22560
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (235 aa)
 
          0.966
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (651 aa)
         
  0.785
CN09_22575
Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (323 aa)
 
          0.697
CN09_22555
Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (300 aa)
              0.697
tldD
Protease TldD; Responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; Derived by automated computational analysis using gene prediction method- Protein Homology (471 aa)
              0.553
CN09_22550
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (340 aa)
              0.444
CN09_03485
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (170 aa)
 
     
  0.428
CN09_13625
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (662 aa)
 
          0.410
CN09_26030
N-methylproline demethylase; Derived by automated computational analysis using gene prediction method- Protein Homology (678 aa)
              0.408
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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