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CN09_22610 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_22610" - Acyltransferase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
CN09_22610Acyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (566 aa)    
Predicted Functional Partners:
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
              0.948
CN09_22605
Sugar ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (425 aa)
 
     
  0.791
CN09_04325
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (193 aa)
   
   
  0.739
cpsB
Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family (475 aa)
   
   
  0.641
CN09_24525
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (578 aa)
 
     
  0.559
CN09_14285
VirR; Derived by automated computational analysis using gene prediction method- Protein Homology (176 aa)
   
        0.534
CN09_05765
Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (614 aa)
 
   
  0.529
CN09_20385
Peptide ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (731 aa)
 
        0.513
CN09_25910
Peptidase M48; Derived by automated computational analysis using gene prediction method- Protein Homology (628 aa)
 
        0.500
CN09_01860
D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily (331 aa)
   
   
  0.488
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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