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CN09_22780 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_22780" - ABC transporter permease in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
CN09_22780ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (322 aa)    
Predicted Functional Partners:
CN09_22770
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (313 aa)
     
  0.959
CN09_22785
Aryldialkylphosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (358 aa)
 
          0.956
CN09_22775
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (264 aa)
   
  0.935
CN09_22790
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (256 aa)
 
          0.928
CN09_22795
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway (301 aa)
 
     
  0.928
CN09_22805
Allantoate amidohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (413 aa)
              0.856
CN09_22800
BtpA family membrane complex biogenesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (280 aa)
 
          0.824
CN09_30845
D-ribose transporter ATP-binding protein; With RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method- Protein Homology (492 aa)
   
  0.779
CN09_20960
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (309 aa)
   
  0.768
CN09_22120
D-ribose transporter ATP-binding protein; With RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method- Protein Homology (506 aa)
   
  0.761
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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