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CN09_23155 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_23155" - 6-phosphogluconolactonase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_231556-phosphogluconolactonase; Derived by automated computational analysis using gene prediction method- Protein Homology (390 aa)    
Predicted Functional Partners:
CN09_23160
Probable 5-dehydro-4-deoxyglucarate dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the DapA family (302 aa)
 
     
  0.700
CN09_23165
Mannonate dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (324 aa)
         
  0.613
CN09_23170
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (236 aa)
              0.477
CN09_06365
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH; Belongs to the 6-phosphogluconate dehydrogenase family (475 aa)
 
     
  0.435
CN09_30365
Dihydrodipicolinate synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the DapA family (309 aa)
   
     
  0.423
CN09_27705
Cell wall anchor protein; Derived by automated computational analysis using gene prediction method- Protein Homology (497 aa)
 
          0.408
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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