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CN09_23280 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_23280" - Homocysteine methyltransferase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_23280Homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
              0.868
CN09_23270
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (276 aa)
 
          0.763
CN09_06280
Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method- Protein Homology (141 aa)
              0.714
CN09_23275
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (536 aa)
              0.709
CN09_23265
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (326 aa)
              0.709
CN09_12525
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (165 aa)
              0.707
CN09_20705
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (204 aa)
              0.652
engB
Probable GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation (219 aa)
              0.652
clpX
ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (425 aa)
              0.652
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2’-deoxyuridine- 5’-monophosphate (dUMP) to 2’-deoxythymidine-5’-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis (307 aa)
         
  0.649
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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