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CN09_23545 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_23545" - ABC transporter permease in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_23545ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (231 aa)    
Predicted Functional Partners:
artP
Arginine transporter ATP-binding subunit; With ArtMQJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method- Protein Homology (242 aa)
 
  0.957
CN09_23540
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (278 aa)
   
  0.927
CN09_23555
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (972 aa)
 
     
  0.838
CN09_26760
Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
 
  0.824
CN09_21640
Amino acid transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (269 aa)
 
  0.815
CN09_23550
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (296 aa)
              0.812
CN09_31980
Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)
 
  0.807
CN09_31545
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
 
  0.806
CN09_23565
Dihydropyrimidinase; Catalyzes the hydrolytic cleavage of imides that range from linear to heterocyclic and that include hydantoins, dihydropyrimidines, and phthalimides; Derived by automated computational analysis using gene prediction method- Protein Homology (477 aa)
         
  0.806
CN09_31245
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (262 aa)
 
  0.802
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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