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CN09_23550 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_23550" - 4-hydroxy-tetrahydrodipicolinate synthase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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CN09_235504-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (296 aa)    
Predicted Functional Partners:
CN09_23555
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (972 aa)
 
   
  0.967
artP
Arginine transporter ATP-binding subunit; With ArtMQJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method- Protein Homology (242 aa)
   
        0.852
CN09_23570
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (138 aa)
 
          0.849
CN09_23565
Dihydropyrimidinase; Catalyzes the hydrolytic cleavage of imides that range from linear to heterocyclic and that include hydantoins, dihydropyrimidines, and phthalimides; Derived by automated computational analysis using gene prediction method- Protein Homology (477 aa)
   
        0.831
CN09_23545
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (231 aa)
              0.812
dapB
4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (274 aa)
 
   
  0.801
CN09_23540
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (278 aa)
 
     
  0.748
CN09_26870
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (395 aa)
 
   
  0.637
CN09_14955
Proline racemase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the proline racemase family (345 aa)
 
   
  0.551
CN09_21085
Hydroxyproline-2-epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the proline racemase family (332 aa)
 
   
  0.502
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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