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CN09_23580 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_23580" - ArsR family transcriptional regulator in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
CN09_23580ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (153 aa)    
Predicted Functional Partners:
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family (1234 aa)
 
     
  0.975
CN09_28360
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (143 aa)
   
          0.769
acdS
1-aminocyclopropane-1-carboxylate deaminase; Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source; Belongs to the ACC deaminase/D-cysteine desulfhydrase family (337 aa)
         
  0.765
CN09_14235
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (154 aa)
   
     
  0.735
CN09_34055
Thiamine biosynthesis protein ThiF; Derived by automated computational analysis using gene prediction method- Protein Homology (256 aa)
     
      0.678
CN09_08485
Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the AlaDH/PNT family (372 aa)
         
  0.667
CN09_05440
Lysine transporter LysE; Derived by automated computational analysis using gene prediction method- Protein Homology (197 aa)
         
  0.654
CN09_08710
ATPase AAA; Derived by automated computational analysis using gene prediction method- Protein Homology (438 aa)
              0.623
CN09_31235
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (143 aa)
   
          0.615
CN09_18950
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (143 aa)
   
          0.559
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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