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CN09_23710 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_23710" - Succinoglycan biosynthesis protein exoh in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
CN09_23710Succinoglycan biosynthesis protein exoh; Derived by automated computational analysis using gene prediction method- Protein Homology (370 aa)    
Predicted Functional Partners:
CN09_23705
1,3-1,4-beta-glycanase; Derived by automated computational analysis using gene prediction method- Protein Homology (267 aa)
 
     
  0.956
CN09_23700
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology (402 aa)
 
     
  0.904
CN09_23695
Succinoglycan biosynthesis protein exoa; Derived by automated computational analysis using gene prediction method- Protein Homology (332 aa)
 
     
  0.886
CN09_23675
Chain-length determining protein; Derived by automated computational analysis using gene prediction method- Protein Homology (783 aa)
 
     
  0.862
CN09_23725
Succinoglycan biosynthesis protein exow; Derived by automated computational analysis using gene prediction method- Protein Homology (319 aa)
 
     
  0.856
CN09_23685
Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (349 aa)
 
     
  0.849
CN09_23690
Glycosyl transferase family A; Derived by automated computational analysis using gene prediction method- Protein Homology (313 aa)
 
     
  0.840
CN09_24345
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
 
     
  0.798
CN09_09030
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (264 aa)
 
     
  0.798
CN09_23720
Succinoglycan biosynthesis protein exop; Derived by automated computational analysis using gene prediction method- Protein Homology (495 aa)
 
     
  0.795
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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