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CN09_23740 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_23740" - Exopolysaccharide production repressor exox in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
CN09_23740Exopolysaccharide production repressor exox; Derived by automated computational analysis using gene prediction method- Protein Homology (96 aa)    
Predicted Functional Partners:
CN09_23735
Glycosyl transferase family A; Derived by automated computational analysis using gene prediction method- Protein Homology (340 aa)
 
          0.890
CN09_23755
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (430 aa)
   
     
  0.774
CN09_23700
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology (402 aa)
   
     
  0.745
CN09_23750
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (424 aa)
   
     
  0.745
CN09_25420
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (81 aa)
   
          0.734
CN09_23710
Succinoglycan biosynthesis protein exoh; Derived by automated computational analysis using gene prediction method- Protein Homology (370 aa)
   
     
  0.724
CN09_23705
1,3-1,4-beta-glycanase; Derived by automated computational analysis using gene prediction method- Protein Homology (267 aa)
   
     
  0.721
CN09_24810
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (595 aa)
   
          0.710
CN09_23760
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (333 aa)
   
     
  0.697
CN09_23685
Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (349 aa)
   
          0.686
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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