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CN09_23780 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_23780" - ABC transporter substrate-binding protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_23780ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (329 aa)    
Predicted Functional Partners:
CN09_23770
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (323 aa)
     
  0.972
CN09_23775
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (516 aa)
 
 
 
  0.954
CN09_01235
Amidohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (278 aa)
              0.727
CN09_23785
Pyridoxal 4-dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (339 aa)
 
     
  0.719
CN09_23795
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (308 aa)
 
          0.694
CN09_18655
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (356 aa)
   
          0.663
CN09_25110
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (354 aa)
     
  0.662
CN09_18645
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (320 aa)
     
  0.660
CN09_22780
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (322 aa)
     
  0.658
CN09_22125
Sugar ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (340 aa)
     
  0.652
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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