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CN09_24000 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_24000" - Protocatechuate 3,4-dioxygenase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
CN09_24000Protocatechuate 3,4-dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)    
Predicted Functional Partners:
CN09_23990
3-carboxy-cis,cis-muconate cycloisomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (349 aa)
 
     
  0.998
CN09_24005
4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (134 aa)
 
     
  0.989
CN09_23995
Protocatechuate 3,4-dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (203 aa)
 
 
0.988
CN09_24010
3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method- Protein Homology (270 aa)
 
     
  0.987
CN09_24015
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (308 aa)
 
     
  0.974
CN09_24020
Catalyzes the formation of protocatechuate from 4-hydroxybenzoate; Derived by automated computational analysis using gene prediction method- Protein Homology (390 aa)
 
   
  0.973
CN09_24035
3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (235 aa)
 
   
  0.805
CN09_24030
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (251 aa)
 
     
  0.799
CN09_24040
3-oxoacid CoA-transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (229 aa)
 
     
  0.797
CN09_32255
NADH oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (341 aa)
 
     
  0.764
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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