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CN09_24035 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_24035" - 3-oxoadipate CoA-transferase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
CN09_240353-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (235 aa)    
Predicted Functional Partners:
CN09_24040
3-oxoacid CoA-transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (229 aa)
 
  0.999
topA
DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (888 aa)
              0.999
CN09_24045
Catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the thiolase family (401 aa)
   
  0.938
CN09_24030
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (251 aa)
 
     
  0.890
CN09_15305
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (736 aa)
   
   
  0.810
CN09_24000
Protocatechuate 3,4-dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)
 
   
  0.805
CN09_23990
3-carboxy-cis,cis-muconate cycloisomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (349 aa)
 
     
  0.802
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
   
   
  0.776
CN09_23995
Protocatechuate 3,4-dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (203 aa)
 
     
  0.767
CN09_32240
mRNA 3’-end processing factor; Derived by automated computational analysis using gene prediction method- Protein Homology (312 aa)
   
  0.766
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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