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CN09_24290 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_24290" - Endoribonuclease L-PSP in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_24290Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)    
Predicted Functional Partners:
CN09_24295
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)
 
          0.925
CN09_13665
Alanine racemase; Derived by automated computational analysis using gene prediction method- Protein Homology (367 aa)
 
        0.766
CN09_24280
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (221 aa)
              0.730
CN09_24275
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (220 aa)
              0.730
CN09_12320
Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method- Protein Homology (127 aa)
   
          0.728
CN09_24285
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (256 aa)
              0.704
CN09_24270
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 3 family (282 aa)
 
          0.687
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family (954 aa)
              0.513
CN09_13690
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
 
          0.498
CN09_13695
Beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method- Protein Homology (639 aa)
 
          0.489
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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