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CN09_24330 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_24330" - LacI family transcriptional regulator in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Databases
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[Homology]
Score
CN09_24330LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (320 aa)    
Predicted Functional Partners:
CN09_24315
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (348 aa)
     
  0.912
CN09_32890
Aldolase; Derived by automated computational analysis using gene prediction method- Protein Homology (272 aa)
 
 
  0.896
CN09_32815
Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (337 aa)
   
  0.813
CN09_24325
Lipase; Derived by automated computational analysis using gene prediction method- Protein Homology (497 aa)
 
 
  0.770
CN09_24335
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (338 aa)
         
  0.698
CN09_14720
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway (299 aa)
         
  0.696
CN09_13440
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate (257 aa)
              0.695
CN09_32810
Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (334 aa)
   
  0.660
CN09_32885
Xylulose kinase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the FGGY kinase family (509 aa)
 
   
  0.563
CN09_31060
Xylulose kinase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the FGGY kinase family (509 aa)
 
   
  0.538
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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