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CN09_24355 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_24355" - Uncharacterized protein in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_24355Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (422 aa)    
Predicted Functional Partners:
CN09_24350
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (313 aa)
              0.933
CN09_10610
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (296 aa)
 
   
  0.926
CN09_24360
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (360 aa)
     
 
  0.914
CN09_12395
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (601 aa)
         
  0.789
CN09_03450
Sulfatase; Derived by automated computational analysis using gene prediction method- Protein Homology (585 aa)
   
 
  0.787
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
   
 
  0.739
CN09_02365
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (406 aa)
     
 
  0.682
CN09_01955
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (233 aa)
 
   
  0.446
CN09_23675
Chain-length determining protein; Derived by automated computational analysis using gene prediction method- Protein Homology (783 aa)
 
     
  0.436
CN09_28690
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (459 aa)
   
 
  0.429
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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