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CN09_24525 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_24525" - Exopolysaccharide biosynthesis protein in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Databases
Textmining
[Homology]
Score
CN09_24525Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (578 aa)    
Predicted Functional Partners:
cpsB
Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family (475 aa)
   
 
  0.999
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
   
   
  0.999
CN09_24520
Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (679 aa)
   
  0.999
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (520 aa)
   
      0.999
ispDF
Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) (406 aa)
   
        0.999
CN09_12395
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (601 aa)
         
  0.982
CN09_24515
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (466 aa)
 
     
  0.973
CN09_23750
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (424 aa)
 
 
  0.970
CN09_13625
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (662 aa)
   
   
  0.968
CN09_24530
Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (333 aa)
 
     
  0.968
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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