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ugpC protein (Agrobacterium rhizogenes) - STRING interaction network
"ugpC" - Sn-glycerol-3-phosphate import ATP-binding protein UgpC in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
ugpCSn-glycerol-3-phosphate import ATP-binding protein UgpC; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system (350 aa)    
Predicted Functional Partners:
CN09_24745
Glycerol-3-phosphate transporter permease; With UgpEC is involved in the uptake of glycerol-3-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology (293 aa)
 
 
  0.952
CN09_24740
Sn-glycerol-3-phosphate transport system permease protein UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane (282 aa)
 
 
  0.949
CN09_24750
Glycerol-3-phosphate ABC transporter substrate-binding protein; With UgpACE is involved in the uptake of glycerol-3-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology (436 aa)
 
 
  0.776
CN09_21445
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (284 aa)
 
 
  0.699
CN09_21440
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (308 aa)
 
 
  0.670
CN09_08435
Glycerol-3-phosphate transporter permease; With UgpEC is involved in the uptake of glycerol-3-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology (294 aa)
 
 
  0.651
CN09_19870
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (307 aa)
 
  0.650
CN09_26185
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (292 aa)
 
 
  0.641
CN09_23455
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (278 aa)
 
  0.629
CN09_25075
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (295 aa)
 
  0.624
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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