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CN09_24755 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_24755" - Membrane protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
CN09_24755Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (312 aa)    
Predicted Functional Partners:
CN09_24760
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (252 aa)
 
          0.839
CN09_02725
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
 
        0.638
CN09_07200
Amino acid transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (199 aa)
 
          0.492
CN09_24750
Glycerol-3-phosphate ABC transporter substrate-binding protein; With UgpACE is involved in the uptake of glycerol-3-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology (436 aa)
              0.452
CN09_16060
Threonine transporter RhtB; Derived by automated computational analysis using gene prediction method- Protein Homology (203 aa)
 
          0.427
CN09_05440
Lysine transporter LysE; Derived by automated computational analysis using gene prediction method- Protein Homology (197 aa)
 
          0.426
CN09_24770
Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (394 aa)
   
   
  0.423
CN09_24765
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (187 aa)
              0.414
CN09_10375
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (369 aa)
   
   
  0.406
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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