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CN09_24770 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_24770" - Transporter in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_24770Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (394 aa)    
Predicted Functional Partners:
CN09_24765
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (187 aa)
 
          0.901
CN09_24760
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (252 aa)
         
  0.537
CN09_21325
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (281 aa)
 
     
  0.509
CN09_24775
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (68 aa)
              0.484
CN09_11070
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (120 aa)
 
     
  0.477
CN09_07355
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (291 aa)
 
 
  0.473
CN09_11065
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (174 aa)
 
          0.447
CN09_24755
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (312 aa)
   
   
  0.423
CN09_16160
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (110 aa)
 
          0.420
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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