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CN09_24865 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_24865" - RpiR family transcriptional regulator in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_24865RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)    
Predicted Functional Partners:
CN09_24870
Preprotein translocase subunit YidC; Derived by automated computational analysis using gene prediction method- Protein Homology (319 aa)
 
          0.917
CN09_24875
Iron ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily (339 aa)
 
          0.724
CN09_24880
Heme ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily (344 aa)
 
          0.693
CN09_24885
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (263 aa)
 
          0.620
CN09_24895
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method- Protein Homology (734 aa)
 
          0.515
rutD
Putative aminoacrylate hydrolase RutD; May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation (262 aa)
 
          0.438
CN09_11580
5-dehydro-2-deoxygluconokinase; Derived by automated computational analysis using gene prediction method- Protein Homology (644 aa)
         
  0.428
CN09_24860
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (280 aa)
              0.424
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling (307 aa)
 
   
  0.411
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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