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CN09_24870 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_24870" - Preprotein translocase subunit YidC in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
CN09_24870Preprotein translocase subunit YidC; Derived by automated computational analysis using gene prediction method- Protein Homology (319 aa)    
Predicted Functional Partners:
CN09_24875
Iron ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily (339 aa)
 
 
  0.944
CN09_24880
Heme ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily (344 aa)
 
 
  0.941
CN09_24885
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (263 aa)
 
 
  0.928
CN09_24865
RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
 
          0.917
CN09_05300
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (150 aa)
 
          0.690
CN09_24895
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method- Protein Homology (734 aa)
 
   
  0.679
CN09_20770
Iron-hydroxamate transporter ATP-binding subunit; Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (266 aa)
 
 
  0.665
CN09_07710
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme; In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family (478 aa)
         
  0.635
CN09_23625
Precorrin-6Y methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (408 aa)
         
  0.614
CN09_03440
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (340 aa)
 
          0.520
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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