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CN09_24925 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_24925" - Efflux pump membrane transporter in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_24925Efflux pump membrane transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (1044 aa)    
Predicted Functional Partners:
CN09_24920
Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (430 aa)
 
  0.978
CN09_24930
RND transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (502 aa)
 
  0.919
CN09_28865
Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (438 aa)
 
  0.873
CN09_31350
RND transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (407 aa)
 
  0.870
CN09_29010
Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (389 aa)
 
  0.861
CN09_02750
RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (394 aa)
 
  0.829
CN09_34005
Nodulation protein NodT; Derived by automated computational analysis using gene prediction method- Protein Homology (484 aa)
 
  0.820
CN09_29340
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (382 aa)
 
  0.792
CN09_28885
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (491 aa)
 
  0.784
CN09_11765
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (414 aa)
 
  0.778
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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