CN09_24985 protein (Agrobacterium rhizogenes)

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[Homology]

Score

CN09_24985

Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology (529 aa)

Predicted Functional Partners:

CN09_24975

0.931

CN09_24980

0.929

CN09_24970

0.908

CN09_24995

0.863

lcdH

0.858

CN09_23270

0.838

CN09_25010

0.830

CN09_23265

0.827

CN09_24955

0.782

CN09_24990

0.762

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_23265	CN09_23270	CN09_23265	CN09_23270	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.975
CN09_23265	CN09_24955	CN09_23265	CN09_24955	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.511
CN09_23265	CN09_24970	CN09_23265	CN09_24970	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily	0.661
CN09_23265	CN09_24975	CN09_23265	CN09_24975	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.845
CN09_23265	CN09_24985	CN09_23265	CN09_24985	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.827
CN09_23265	CN09_24995	CN09_23265	CN09_24995	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.413
CN09_23265	lcdH	CN09_23265	CN09_25005	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	L-carnitine dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3-dehydrocarnitine	0.409
CN09_23270	CN09_23265	CN09_23270	CN09_23265	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.975
CN09_23270	CN09_24955	CN09_23270	CN09_24955	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.599
CN09_23270	CN09_24970	CN09_23270	CN09_24970	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily	0.683
CN09_23270	CN09_24980	CN09_23270	CN09_24980	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.845
CN09_23270	CN09_24985	CN09_23270	CN09_24985	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.838
CN09_23270	CN09_24990	CN09_23270	CN09_24990	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology	0.406
CN09_23270	CN09_24995	CN09_23270	CN09_24995	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.499
CN09_23270	CN09_25010	CN09_23270	CN09_25010	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	NADPH dependend quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.438
CN09_23270	lcdH	CN09_23270	CN09_25005	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	L-carnitine dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3-dehydrocarnitine	0.538
CN09_24955	CN09_23265	CN09_24955	CN09_23265	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.511
CN09_24955	CN09_23270	CN09_24955	CN09_23270	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.599
CN09_24955	CN09_24970	CN09_24955	CN09_24970	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily	0.613
CN09_24955	CN09_24975	CN09_24955	CN09_24975	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.730

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