CN09_25040 protein (Agrobacterium rhizogenes)

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Score

CN09_25040

Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology (506 aa)

Predicted Functional Partners:

CN09_25035

0.934

CN09_25045

0.868

polA

0.720

CN09_25030

0.558

CN09_23540

0.511

CN09_23555

0.503

CN09_19025

0.498

CN09_21700

0.481

CN09_06170

0.459

CN09_25780

0.453

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_06170	CN09_25040	CN09_06170	CN09_25040	Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.459
CN09_19025	CN09_25040	CN09_19025	CN09_25040	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.498
CN09_21700	CN09_25035	CN09_21700	CN09_25035	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	0.577
CN09_21700	CN09_25040	CN09_21700	CN09_25040	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.481
CN09_23540	CN09_23555	CN09_23540	CN09_23555	Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology	0.847
CN09_23540	CN09_25035	CN09_23540	CN09_25035	Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	0.497
CN09_23540	CN09_25040	CN09_23540	CN09_25040	Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.511
CN09_23555	CN09_23540	CN09_23555	CN09_23540	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.847
CN09_23555	CN09_25040	CN09_23555	CN09_25040	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.503
CN09_23555	CN09_25045	CN09_23555	CN09_25045	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology	D-amino acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.521
CN09_23555	polA	CN09_23555	CN09_13050	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	0.899
CN09_25030	CN09_25035	CN09_25030	CN09_25035	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	0.686
CN09_25030	CN09_25040	CN09_25030	CN09_25040	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.558
CN09_25030	CN09_25045	CN09_25030	CN09_25045	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	D-amino acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.525
CN09_25035	CN09_21700	CN09_25035	CN09_21700	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.577
CN09_25035	CN09_23540	CN09_25035	CN09_23540	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.497
CN09_25035	CN09_25030	CN09_25035	CN09_25030	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.686
CN09_25035	CN09_25040	CN09_25035	CN09_25040	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.934
CN09_25035	CN09_25045	CN09_25035	CN09_25045	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	D-amino acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.845
CN09_25040	CN09_06170	CN09_25040	CN09_06170	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	0.459

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