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CN09_25040 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_25040" - Amino acid ABC transporter ATP-binding protein in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_25040Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (506 aa)    
Predicted Functional Partners:
CN09_25035
Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 3 family (275 aa)
 
  0.934
CN09_25045
D-amino acid oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (375 aa)
 
     
  0.868
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
              0.720
CN09_25030
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (359 aa)
 
 
 
  0.558
CN09_23540
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (278 aa)
 
  0.511
CN09_23555
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (972 aa)
         
  0.503
CN09_19025
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 3 family (281 aa)
 
  0.498
CN09_21700
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (281 aa)
 
 
  0.481
CN09_06170
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 3 family (260 aa)
 
  0.459
CN09_25780
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (314 aa)
 
 
  0.453
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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