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CN09_25255 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_25255" - Polysaccharide deacetylase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
CN09_25255Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (309 aa)    
Predicted Functional Partners:
CN09_25250
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
 
          0.772
CN09_25260
Peptide ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (498 aa)
 
          0.772
CN09_08665
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid (338 aa)
         
  0.730
CN09_25265
Hippurate hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (385 aa)
 
          0.600
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
              0.516
CN09_31490
4-hydroxy-4-methyl-2-oxoglutarate aldolase; Derived by automated computational analysis using gene prediction method- Protein Homology (222 aa)
 
          0.472
CN09_20625
Acetylornithine deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (406 aa)
 
          0.467
CN09_31835
Hydantoin racemase; Derived by automated computational analysis using gene prediction method- Protein Homology (234 aa)
 
          0.464
CN09_31840
DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (279 aa)
 
          0.464
CN09_23695
Succinoglycan biosynthesis protein exoa; Derived by automated computational analysis using gene prediction method- Protein Homology (332 aa)
   
   
  0.435
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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