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CN09_25295 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_25295" - Ferrichrome ABC transporter in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_25295Ferrichrome ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (250 aa)    
Predicted Functional Partners:
CN09_25300
Iron-siderophore ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily (354 aa)
 
  0.995
CN09_29905
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (379 aa)
 
  0.968
CN09_00730
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (374 aa)
 
  0.899
CN09_23235
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (404 aa)
 
  0.897
CN09_25285
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (387 aa)
 
  0.893
CN09_29900
Methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (267 aa)
 
     
  0.879
CN09_32455
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily (344 aa)
 
  0.810
CN09_26795
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily (342 aa)
 
  0.807
CN09_03255
Iron ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily (369 aa)
 
  0.791
CN09_24875
Iron ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily (339 aa)
 
  0.772
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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