CN09_25320 protein (Agrobacterium rhizogenes)

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Score

CN09_25320

DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology (280 aa)

Predicted Functional Partners:

CN09_25325

0.979

CN09_25315

0.966

CN09_25330

0.926

CN09_25335

0.881

CN09_25350

0.856

CN09_23265

0.852

CN09_25355

0.844

CN09_24980

0.842

CN09_25345

0.831

CN09_23260

0.803

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_23260	CN09_23265	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.901
CN09_23260	CN09_24980	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.807
CN09_23260	CN09_25315	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Belongs to the ABC transporter superfamily	0.656
CN09_23260	CN09_25320	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology	0.803
CN09_23260	CN09_25325	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.807
CN09_23260	CN09_25335	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	2-haloalkanoic acid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.504
CN09_23260	CN09_25345	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.611
CN09_23260	CN09_25350	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.669
CN09_23260	CN09_25355	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.578
CN09_23265	CN09_23260	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.901
CN09_23265	CN09_25315	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Belongs to the ABC transporter superfamily	0.528
CN09_23265	CN09_25320	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology	0.852
CN09_23265	CN09_25330	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.693
CN09_23265	CN09_25350	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.433
CN09_23265	CN09_25355	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.448
CN09_24980	CN09_23260	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.807
CN09_24980	CN09_25315	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Belongs to the ABC transporter superfamily	0.502
CN09_24980	CN09_25320	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology	0.842
CN09_24980	CN09_25330	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.654
CN09_24980	CN09_25350	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.413