CN09_25320 protein (Agrobacterium rhizogenes)

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Score

CN09_25320

DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology (280 aa)

Predicted Functional Partners:

CN09_25325

0.979

CN09_25315

0.968

CN09_25330

0.920

CN09_25335

0.881

CN09_25350

0.856

CN09_23265

0.853

CN09_25355

0.844

CN09_24980

0.842

CN09_25345

0.830

CN09_23260

0.788

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_23260	CN09_23265	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.900
CN09_23260	CN09_24980	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.805
CN09_23260	CN09_25315	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily	0.653
CN09_23260	CN09_25320	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology	0.788
CN09_23260	CN09_25325	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.805
CN09_23260	CN09_25335	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	2-haloalkanoic acid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.503
CN09_23260	CN09_25345	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.602
CN09_23260	CN09_25350	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.673
CN09_23260	CN09_25355	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.580
CN09_23265	CN09_23260	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.900
CN09_23265	CN09_25315	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily	0.546
CN09_23265	CN09_25320	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology	0.853
CN09_23265	CN09_25330	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.694
CN09_23265	CN09_25350	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.434
CN09_23265	CN09_25355	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.457
CN09_24980	CN09_23260	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.805
CN09_24980	CN09_25315	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily	0.521
CN09_24980	CN09_25320	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology	0.842
CN09_24980	CN09_25330	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.654
CN09_24980	CN09_25350	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.415