CN09_25440 protein (Agrobacterium rhizogenes)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

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protein homology

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[Homology]

Score

CN09_25440

Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology (230 aa)

Predicted Functional Partners:

CN09_25445

0.798

CN09_16825

0.747

CN09_08630

0.733

ribB

0.709

CN09_14700

0.677

CN09_02985

0.653

CN09_25450

0.642

CN09_07995

0.634

CN09_10910

0.631

CN09_25460

0.616

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_02985	CN09_07995	CN09_02985	CN09_07995	Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.784
CN09_02985	CN09_08630	CN09_02985	CN09_08630	Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.709
CN09_02985	CN09_10910	CN09_02985	CN09_10910	Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.718
CN09_02985	CN09_14700	CN09_02985	CN09_14700	Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.775
CN09_02985	CN09_16825	CN09_02985	CN09_16825	Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology	Invasion protein B; Derived by automated computational analysis using gene prediction method: Protein Homology	0.770
CN09_02985	CN09_25440	CN09_02985	CN09_25440	Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.653
CN09_07995	CN09_02985	CN09_07995	CN09_02985	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology	0.784
CN09_07995	CN09_08630	CN09_07995	CN09_08630	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.685
CN09_07995	CN09_10910	CN09_07995	CN09_10910	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.714
CN09_07995	CN09_14700	CN09_07995	CN09_14700	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.781
CN09_07995	CN09_16825	CN09_07995	CN09_16825	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Invasion protein B; Derived by automated computational analysis using gene prediction method: Protein Homology	0.769
CN09_07995	CN09_25440	CN09_07995	CN09_25440	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.634
CN09_08630	CN09_02985	CN09_08630	CN09_02985	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology	0.709
CN09_08630	CN09_07995	CN09_08630	CN09_07995	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.685
CN09_08630	CN09_10910	CN09_08630	CN09_10910	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.706
CN09_08630	CN09_14700	CN09_08630	CN09_14700	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.696
CN09_08630	CN09_16825	CN09_08630	CN09_16825	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Invasion protein B; Derived by automated computational analysis using gene prediction method: Protein Homology	0.768
CN09_08630	CN09_25440	CN09_08630	CN09_25440	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.733
CN09_10910	CN09_02985	CN09_10910	CN09_02985	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology	0.718
CN09_10910	CN09_07995	CN09_10910	CN09_07995	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.714

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