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CN09_25495 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_25495" - Capsular biosynthesis protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
CN09_25495Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (476 aa)    
Predicted Functional Partners:
CN09_25490
Capsule biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (709 aa)
     
  0.973
CN09_25485
Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (453 aa)
 
     
  0.973
CN09_25505
Capsule biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (401 aa)
 
     
  0.970
CN09_25470
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (255 aa)
 
     
  0.967
CN09_25520
Sugar transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (390 aa)
 
     
  0.945
CN09_01860
D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily (331 aa)
         
  0.943
CN09_25480
Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (400 aa)
 
          0.886
CN09_05430
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (346 aa)
     
  0.876
CN09_25510
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (215 aa)
 
     
  0.872
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (367 aa)
              0.870
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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