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CN09_25585 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_25585" - GntR family transcriptional regulator in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_25585GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (247 aa)    
Predicted Functional Partners:
CN09_28965
N-formimino-L-glutamate deiminase; Derived by automated computational analysis using gene prediction method- Protein Homology (447 aa)
   
  0.934
hutI
Imidazolonepropionase; Derived by automated computational analysis using gene prediction method- Protein Homology (418 aa)
 
   
  0.921
CN09_25580
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (310 aa)
 
     
  0.885
CN09_28945
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (191 aa)
 
        0.800
CN09_28950
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate (561 aa)
 
   
  0.744
CN09_14375
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate (553 aa)
 
   
  0.692
hutH
Catalyzes the degradation of histidine to urocanate and ammmonia; Derived by automated computational analysis using gene prediction method- Protein Homology (511 aa)
 
     
  0.669
CN09_25600
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (222 aa)
              0.655
CN09_25595
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (213 aa)
              0.655
CN09_30010
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (250 aa)
   
          0.648
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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