STRINGSTRING
CN09_25625 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_25625" - Chemotaxis protein CheY in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_25625Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method- Protein Homology (214 aa)    
Predicted Functional Partners:
CN09_25630
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (474 aa)
 
 
  0.988
CN09_24215
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (371 aa)
 
  0.927
CN09_25620
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (234 aa)
              0.788
CN09_16245
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (458 aa)
     
  0.746
CN09_24230
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method- Protein Homology (158 aa)
 
 
 
  0.729
CN09_03065
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (1129 aa)
     
 
  0.692
CN09_00240
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (487 aa)
 
 
  0.689
CN09_15420
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method- Protein Homology (763 aa)
 
 
 
  0.608
CN09_25635
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (216 aa)
 
          0.597
CN09_19725
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (1199 aa)
 
 
 
  0.584
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
Server load: low (9%) [HD]