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CN09_25645 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_25645" - AsnC family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
CN09_25645AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (234 aa)    
Predicted Functional Partners:
CN09_26480
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (225 aa)
   
          0.760
CN09_23535
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (215 aa)
   
          0.751
CN09_17000
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (222 aa)
   
          0.730
CN09_25650
X-Pro dipeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology (381 aa)
 
          0.729
CN09_12750
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (232 aa)
   
          0.717
CN09_07685
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (204 aa)
   
          0.676
CN09_26425
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (261 aa)
   
          0.631
CN09_25640
Dihydrodipicolinate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the DapA family (303 aa)
       
  0.595
CN09_26660
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (237 aa)
 
     
  0.593
CN09_26910
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
 
     
  0.549
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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