CN09_25960 protein (Agrobacterium rhizogenes)

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Score

CN09_25960

DNA polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology (419 aa)

Predicted Functional Partners:

polA

0.999

CN09_18560

0.999

CN09_33540

0.832

CN09_04190

0.804

CN09_19310

0.702

CN09_34540

0.682

CN09_19305

0.672

CN09_34545

0.667

CN09_20180

0.639

CN09_16835

0.639

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_04190	CN09_16835	CN09_04190	CN09_16835	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis	Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B	0.953
CN09_04190	CN09_20180	CN09_04190	CN09_20180	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis	Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the heme-copper respiratory oxidase family	0.884
CN09_04190	CN09_25960	CN09_04190	CN09_25960	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis	DNA polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.804
CN09_04190	polA	CN09_04190	CN09_13050	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.843
CN09_16835	CN09_04190	CN09_16835	CN09_04190	Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis	0.953
CN09_16835	CN09_25960	CN09_16835	CN09_25960	Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B	DNA polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.639
CN09_18560	CN09_25960	CN09_18560	CN09_25960	Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_18560	CN09_33540	CN09_18560	CN09_33540	Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_18560	polA	CN09_18560	CN09_13050	Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.999
CN09_19305	CN09_19310	CN09_19305	CN09_19310	Isocitrate lyase; Derived by automated computational analysis using gene prediction method- Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.935
CN09_19305	CN09_25960	CN09_19305	CN09_25960	Isocitrate lyase; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.672
CN09_19305	CN09_34540	CN09_19305	CN09_34540	Isocitrate lyase; Derived by automated computational analysis using gene prediction method- Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.836
CN09_19310	CN09_19305	CN09_19310	CN09_19305	Transposase; Derived by automated computational analysis using gene prediction method- Protein Homology	Isocitrate lyase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.935
CN09_19310	CN09_25960	CN09_19310	CN09_25960	Transposase; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.702
CN09_19310	CN09_34545	CN09_19310	CN09_34545	Transposase; Derived by automated computational analysis using gene prediction method- Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.862
CN09_20180	CN09_04190	CN09_20180	CN09_04190	Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the heme-copper respiratory oxidase family	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis	0.884
CN09_20180	CN09_25960	CN09_20180	CN09_25960	Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the heme-copper respiratory oxidase family	DNA polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.639
CN09_25960	CN09_04190	CN09_25960	CN09_04190	DNA polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis	0.804
CN09_25960	CN09_16835	CN09_25960	CN09_16835	DNA polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology	Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B	0.639
CN09_25960	CN09_18560	CN09_25960	CN09_18560	DNA polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology	Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999

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