STRINGSTRING
CN09_26205 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_26205" - Adenine deaminase in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_26205Adenine deaminase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family (599 aa)    
Predicted Functional Partners:
CN09_26215
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (220 aa)
              0.821
CN09_26210
Glutathione S-transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (210 aa)
              0.821
CN09_26220
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (66 aa)
              0.812
CN09_18390
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1499 aa)
              0.707
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (494 aa)
         
  0.610
CN09_26225
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (373 aa)
 
     
  0.571
CN09_26250
Chlorohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (452 aa)
 
     
  0.477
amn
AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations (500 aa)
 
     
  0.442
CN09_08760
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (132 aa)
 
          0.400
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
Server load: low (11%) [HD]