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CN09_26430 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_26430" - Glycerophosphodiester phosphodiesterase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
CN09_26430Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method- Protein Homology (270 aa)    
Predicted Functional Partners:
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
   
   
  0.826
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
   
   
  0.758
CN09_26435
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (295 aa)
              0.730
CN09_26455
Peptide ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (535 aa)
 
          0.715
CN09_26440
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (308 aa)
              0.673
CN09_26445
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (288 aa)
              0.668
CN09_26450
Peptide ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (322 aa)
              0.667
CN09_10375
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (369 aa)
   
   
  0.546
CN09_26460
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (340 aa)
         
  0.508
CN09_26425
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (261 aa)
              0.506
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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