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CN09_26505 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_26505" - Alcohol dehydrogenase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_26505Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (340 aa)    
Predicted Functional Partners:
CN09_26500
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 3 family (290 aa)
              0.857
CN09_26515
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (399 aa)
 
     
  0.746
CN09_26480
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (225 aa)
     
 
  0.744
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
         
  0.724
CN09_26490
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (225 aa)
              0.689
CN09_26485
Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)
   
        0.669
CN09_26495
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (224 aa)
              0.665
CN09_26510
D-mannonate oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the mannitol dehydrogenase family (467 aa)
         
  0.643
CN09_18465
NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (318 aa)
 
   
  0.598
CN09_26520
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (234 aa)
     
 
  0.538
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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