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CN09_26610 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_26610" - Hemolysin secretion protein D in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_26610Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology (436 aa)    
Predicted Functional Partners:
CN09_26615
Type I secretion protein; Derived by automated computational analysis using gene prediction method- Protein Homology (581 aa)
   
  0.978
CN09_31135
Peptidase C39; Derived by automated computational analysis using gene prediction method- Protein Homology (710 aa)
 
   
  0.881
CN09_31910
Type I secretion protein; Derived by automated computational analysis using gene prediction method- Protein Homology (582 aa)
   
  0.869
CN09_26605
1,3-1,4-beta-glycanase; Derived by automated computational analysis using gene prediction method- Protein Homology (479 aa)
 
   
  0.583
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (651 aa)
   
 
  0.562
CN09_06065
Aspartic protease; Derived by automated computational analysis using gene prediction method- Protein Homology (233 aa)
   
          0.499
CN09_13450
Aspartyl protease; Derived by automated computational analysis using gene prediction method- Protein Homology (175 aa)
 
          0.471
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
     
 
  0.417
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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