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CN09_26690 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_26690" - Uncharacterized protein in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_26690Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (460 aa)    
Predicted Functional Partners:
CN09_26705
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (305 aa)
 
          0.962
CN09_26700
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (300 aa)
 
          0.961
CN09_26710
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (503 aa)
 
     
  0.872
CN09_26695
Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (551 aa)
              0.852
CN09_26685
Amidase; Derived by automated computational analysis using gene prediction method- Protein Homology (498 aa)
 
          0.847
CN09_26400
Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (513 aa)
 
     
  0.790
CN09_25265
Hippurate hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (385 aa)
 
          0.501
CN09_00975
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (542 aa)
 
     
  0.470
CN09_21325
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (281 aa)
 
 
      0.458
CN09_26385
Peptide ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (500 aa)
 
     
  0.424
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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