Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CN09_11755 | CN09_15305 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.976 |
| CN09_11755 | CN09_17085 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | 0.525 |
| CN09_11755 | CN09_25005 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone | annotation not available | 0.999 |
| CN09_11755 | CN09_26735 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone | Malonyl-coa synthase; Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.745 |
| CN09_11755 | CN09_34320 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.721 |
| CN09_12335 | CN09_17085 | Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method: Protein Homology | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | 0.999 |
| CN09_12335 | CN09_25005 | Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method: Protein Homology | annotation not available | 0.901 |
| CN09_12335 | CN09_26735 | Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method: Protein Homology | Malonyl-coa synthase; Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.722 |
| CN09_12335 | CN09_31930 | Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method: Protein Homology | Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.999 |
| CN09_15305 | CN09_11755 | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone | 0.976 |
| CN09_15305 | CN09_17085 | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | 0.788 |
| CN09_15305 | CN09_25005 | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | annotation not available | 0.885 |
| CN09_15305 | CN09_26735 | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | Malonyl-coa synthase; Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.645 |
| CN09_15305 | CN09_26740 | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | MCD, Malonyl-CoA decarboxylase MCD; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.964 |
| CN09_15305 | CN09_34320 | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.442 |
| CN09_17085 | CN09_11755 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone | 0.525 |
| CN09_17085 | CN09_12335 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.999 |
| CN09_17085 | CN09_15305 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.788 |
| CN09_17085 | CN09_25005 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | annotation not available | 0.735 |
| CN09_17085 | CN09_26730 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | DeoR faimly transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.419 |
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