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CN09_26890 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_26890" - Peptide ABC transporter in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
CN09_26890Peptide ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (319 aa)    
Predicted Functional Partners:
CN09_26885
Peptide ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (318 aa)
 
  0.975
CN09_26895
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (335 aa)
 
  0.973
CN09_26900
Peptide ABC transporter ATP-binding protein; With OppABCD is involved in the transport of oligopeptides; OppF and OppD are ATP-binding proteins; Derived by automated computational analysis using gene prediction method- Protein Homology (330 aa)
 
  0.968
CN09_26880
Peptide ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (546 aa)
 
   
  0.930
CN09_26905
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (353 aa)
 
          0.924
CN09_26910
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
 
     
  0.874
CN09_33465
Glutathione ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (313 aa)
 
  0.739
CN09_26420
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (309 aa)
 
  0.733
CN09_33420
Glutathione ABC transporter permease; With GsiABD is involved in the transport of glutathione into the cell; Derived by automated computational analysis using gene prediction method- Protein Homology (315 aa)
 
  0.730
CN09_22905
Peptide permease BMEII0860; Derived by automated computational analysis using gene prediction method- Protein Homology (319 aa)
 
  0.730
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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