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CN09_27065 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_27065" - Uncharacterized protein in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_27065Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (127 aa)    
Predicted Functional Partners:
CN09_27045
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (105 aa)
 
          0.723
CN09_27060
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (544 aa)
              0.634
CN09_32050
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (477 aa)
   
          0.618
CN09_22240
DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (83 aa)
   
          0.585
CN09_24460
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)
   
          0.582
CN09_22930
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (425 aa)
   
          0.565
CN09_27050
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (85 aa)
 
          0.561
CN09_20385
Peptide ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (731 aa)
   
          0.538
CN09_28335
Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (244 aa)
   
          0.533
CN09_27055
10 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter (105 aa)
              0.526
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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