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CN09_27080 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_27080" - LysR family transcriptional regulator in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_27080LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (404 aa)    
Predicted Functional Partners:
CN09_27090
2-pyrone-4,6-dicarboxylate hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (295 aa)
 
          0.857
CN09_05320
3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (294 aa)
 
     
  0.826
CN09_05360
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (223 aa)
 
          0.798
CN09_05365
4-oxalomesaconate tautomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (351 aa)
 
          0.731
CN09_30980
S-adenosylmethionine- 2-demethylmenaquinone methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (224 aa)
 
          0.701
CN09_05350
GlcNAc-PI de-N-acetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (244 aa)
 
     
  0.653
CN09_31490
4-hydroxy-4-methyl-2-oxoglutarate aldolase; Derived by automated computational analysis using gene prediction method- Protein Homology (222 aa)
 
          0.609
CN09_33095
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (360 aa)
 
          0.586
CN09_21550
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (326 aa)
   
          0.527
CN09_27075
Involved in the transport of C4-dicarboxylates across the membrane; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the dicarboxylate/amino acid-cation symporter (DAACS) (TC 2.A.23) family (449 aa)
         
  0.521
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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