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CN09_27270 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_27270" - SAM-dependent methyltransferase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_27270SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (294 aa)    
Predicted Functional Partners:
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family (328 aa)
   
   
  0.980
CN09_27265
Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
         
  0.885
CN09_27260
Glutaredoxin; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (85 aa)
   
   
  0.869
CN09_27255
Nitrilase; Derived by automated computational analysis using gene prediction method- Protein Homology (285 aa)
         
  0.857
CN09_27250
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (142 aa)
              0.856
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (310 aa)
 
   
  0.786
rpsO
30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome (89 aa)
   
      0.784
CN09_09945
Biotin biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (255 aa)
         
  0.777
CN09_08175
Methionine aminopeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology (278 aa)
   
 
  0.767
lepA
Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (610 aa)
     
 
  0.767
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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