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CN09_27385 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_27385" - Dehydrogenase in Agrobacterium rhizogenes
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
CN09_27385Dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (309 aa)    
Predicted Functional Partners:
CN09_27380
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (274 aa)
 
          0.812
CN09_27390
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (63 aa)
              0.650
CN09_02665
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (188 aa)
 
          0.608
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
         
  0.583
CN09_13885
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (128 aa)
 
     
  0.576
CN09_06920
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (158 aa)
   
          0.549
CN09_14075
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (358 aa)
   
          0.548
CN09_12955
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (221 aa)
   
          0.533
CN09_24095
Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the phosphoglycerate mutase family (248 aa)
 
        0.524
CN09_02795
Choline kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (292 aa)
   
          0.512
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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