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CN09_27410 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_27410" - Membrane protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_27410Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (170 aa)    
Predicted Functional Partners:
CN09_06240
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (535 aa)
         
  0.999
CN09_27405
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (197 aa)
            0.983
CN09_06305
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source (559 aa)
   
        0.880
CN09_15420
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method- Protein Homology (763 aa)
         
  0.865
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (494 aa)
         
  0.830
CN09_09700
Glycosyl hydrolase family 5; Derived by automated computational analysis using gene prediction method- Protein Homology (146 aa)
 
          0.815
CN09_07520
DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (223 aa)
   
   
  0.811
CN09_17060
DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (245 aa)
 
 
 
  0.791
nadD
Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) (205 aa)
 
          0.782
CN09_17940
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (486 aa)
 
          0.771
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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