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CN09_27415 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_27415" - MFS transporter in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
CN09_27415MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (185 aa)    
Predicted Functional Partners:
CN09_18560
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1702 aa)
         
  0.981
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
              0.930
CN09_27420
DNA-3-methyladenine glycosidase; Derived by automated computational analysis using gene prediction method- Protein Homology (214 aa)
 
          0.889
CN09_27425
Glutamyl-Q tRNA(Asp) ligase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family (293 aa)
 
          0.871
CN09_27445
Cob(I)yrinic acid a c-diamide adenosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (192 aa)
              0.744
CN09_27440
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (67 aa)
              0.736
CN09_06330
Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (274 aa)
         
  0.712
CN09_27460
3-hydroxybutyryl-CoA dehydrogenase; Converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; Derived by automated computational analysis using gene prediction method- Protein Homology (292 aa)
              0.695
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX; Belongs to the ferrochelatase family (341 aa)
   
   
  0.675
era
GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (315 aa)
              0.626
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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