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CN09_27485 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_27485" - Membrane protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_27485Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (919 aa)    
Predicted Functional Partners:
nnrD
Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family (491 aa)
 
          0.964
CN09_04105
RNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (941 aa)
   
          0.781
CN09_04100
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (690 aa)
   
          0.780
pheT
Phenylalanine--tRNA ligase beta subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily (807 aa)
         
  0.747
CN09_04110
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (306 aa)
   
          0.747
CN09_02050
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (209 aa)
 
          0.733
CN09_07930
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (275 aa)
   
          0.730
CN09_28075
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (532 aa)
   
          0.714
hisG
ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N’-(5’-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity; Belongs to the ATP phosphoribosyltransferase family. Short subfamily (237 aa)
     
 
  0.698
CN09_10335
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (169 aa)
   
          0.695
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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